STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETK33659.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (315 aa)    
Predicted Functional Partners:
ETK33658.1
Beta-lactamase.
 
     0.810
ETK36032.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.738
ETK33660.1
Hypothetical protein.
 
     0.622
ETK33657.1
acetoacetyl-CoA synthetase; AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase.
       0.590
ETK36496.1
Glutamate synthase.
     
 0.443
ETK34376.1
Hypothetical protein.
  
    0.401
Your Current Organism:
Microbispora sp. ATCC PTA5024
NCBI taxonomy Id: 316330
Other names: M. sp. ATCC PTA-5024, Microbispora sp. ATCC PTA-5024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.