Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETK32722.1 | ETK32725.1 | MPTA5024_28395 | MPTA5024_28410 | Phospholipid phosphatase. | Hypothetical protein. | 0.458 |
ETK32722.1 | ETK32726.1 | MPTA5024_28395 | MPTA5024_28415 | Phospholipid phosphatase. | MarR family transcriptional regulator. | 0.422 |
ETK32725.1 | ETK32722.1 | MPTA5024_28410 | MPTA5024_28395 | Hypothetical protein. | Phospholipid phosphatase. | 0.458 |
ETK32725.1 | ETK32726.1 | MPTA5024_28410 | MPTA5024_28415 | Hypothetical protein. | MarR family transcriptional regulator. | 0.448 |
ETK32726.1 | ETK32722.1 | MPTA5024_28415 | MPTA5024_28395 | MarR family transcriptional regulator. | Phospholipid phosphatase. | 0.422 |
ETK32726.1 | ETK32725.1 | MPTA5024_28415 | MPTA5024_28410 | MarR family transcriptional regulator. | Hypothetical protein. | 0.448 |
ETK32726.1 | ETK32727.1 | MPTA5024_28415 | MPTA5024_28420 | MarR family transcriptional regulator. | Alpha/beta hydrolase. | 0.646 |
ETK32726.1 | ETK32884.1 | MPTA5024_28415 | MPTA5024_27145 | MarR family transcriptional regulator. | Hypothetical protein. | 0.485 |
ETK32726.1 | ETK36740.1 | MPTA5024_28415 | MPTA5024_07655 | MarR family transcriptional regulator. | Hypothetical protein. | 0.424 |
ETK32727.1 | ETK32726.1 | MPTA5024_28420 | MPTA5024_28415 | Alpha/beta hydrolase. | MarR family transcriptional regulator. | 0.646 |
ETK32884.1 | ETK32726.1 | MPTA5024_27145 | MPTA5024_28415 | Hypothetical protein. | MarR family transcriptional regulator. | 0.485 |
ETK36740.1 | ETK32726.1 | MPTA5024_07655 | MPTA5024_28415 | Hypothetical protein. | MarR family transcriptional regulator. | 0.424 |