STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETK32556.1LytR family transcriptional regulator. (459 aa)    
Predicted Functional Partners:
ETK32535.1
Hypothetical protein.
  
    0.514
ETK33285.1
Hypothetical protein.
  
     0.482
ETK33425.1
Glycosyl transferase family 2.
 
     0.475
ETK32555.1
Hypothetical protein.
       0.459
ETK33489.1
Hypothetical protein.
  
  
 0.446
ETK34310.1
UDP-phosphate galactose phosphotransferase.
 
   
 0.423
ETK34425.1
Pilus assembly protein TadB.
  
     0.413
ETK34506.1
Cytochrome C biogenesis protein ResB.
  
     0.406
Your Current Organism:
Microbispora sp. ATCC PTA5024
NCBI taxonomy Id: 316330
Other names: M. sp. ATCC PTA-5024, Microbispora sp. ATCC PTA-5024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.