STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETK31900.1ABC transporter permease. (224 aa)    
Predicted Functional Partners:
ETK31899.1
Glycine/betaine ABC transporter ATPase.
 
 0.999
ETK31902.1
Proline/glycine/betaine ABC transporter substrate-binding protein.
 
 
 0.996
ETK31901.1
ABC transporter permease.
 
 
0.995
ETK35856.1
Glycine/betaine ABC transporter ATP-binding protein.
 
 
 0.757
ETK35855.1
ABC transporter permease.
 
 
 
0.611
ETK35854.1
Glycine betaine-binding lipoprotein.
 
 
 0.455
ETK31898.1
Hypothetical protein.
       0.400
Your Current Organism:
Microbispora sp. ATCC PTA5024
NCBI taxonomy Id: 316330
Other names: M. sp. ATCC PTA-5024, Microbispora sp. ATCC PTA-5024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.