STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETK31647.1Geranylgeranyl reductase. (381 aa)    
Predicted Functional Partners:
ETK37170.1
Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.917
ETK31818.1
Electron transfer flavoprotein subunit beta.
  
 
 0.781
ETK36717.1
Hypothetical protein.
  
 
  0.765
ETK31819.1
Electron transfer flavoprotein subunit alpha.
  
 
 0.675
ETK31648.1
Beta-lactamase.
       0.656
ETK38089.1
Membrane protein.
 
 
 0.620
ETK33017.1
Hypothetical protein.
   
  
 0.581
ETK30477.1
Phytoene synthase.
 
 
 0.518
ETK38088.1
Stilbene synthase.
 
  
 0.497
ETK37103.1
Magnesium chelatase.
 
  
 0.478
Your Current Organism:
Microbispora sp. ATCC PTA5024
NCBI taxonomy Id: 316330
Other names: M. sp. ATCC PTA-5024, Microbispora sp. ATCC PTA-5024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.