Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETK30539.1 | ETK31373.1 | MPTA5024_39875 | MPTA5024_34950 | Hypothetical protein. | UDP-N-acetylmuramate dehydrogenase. | 0.608 |
ETK30539.1 | ETK31380.1 | MPTA5024_39875 | MPTA5024_34985 | Hypothetical protein. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.608 |
ETK30539.1 | ETK32540.1 | MPTA5024_39875 | MPTA5024_29365 | Hypothetical protein. | Aminotransferase. | 0.727 |
ETK30539.1 | ETK33082.1 | MPTA5024_39875 | MPTA5024_26135 | Hypothetical protein. | Aspartate aminotransferase. | 0.727 |
ETK30539.1 | ETK37586.1 | MPTA5024_39875 | MPTA5024_03250 | Hypothetical protein. | Transcriptional regulator. | 0.603 |
ETK30539.1 | glyA | MPTA5024_39875 | MPTA5024_29550 | Hypothetical protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.668 |
ETK30539.1 | glyA-2 | MPTA5024_39875 | MPTA5024_34735 | Hypothetical protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.668 |
ETK30539.1 | pepA | MPTA5024_39875 | MPTA5024_10100 | Hypothetical protein. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.670 |
ETK30539.1 | pepA-2 | MPTA5024_39875 | MPTA5024_36310 | Hypothetical protein. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.670 |
ETK30539.1 | whiB-4 | MPTA5024_39875 | MPTA5024_32090 | Hypothetical protein. | WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.644 |
ETK31373.1 | ETK30539.1 | MPTA5024_34950 | MPTA5024_39875 | UDP-N-acetylmuramate dehydrogenase. | Hypothetical protein. | 0.608 |
ETK31373.1 | ETK31380.1 | MPTA5024_34950 | MPTA5024_34985 | UDP-N-acetylmuramate dehydrogenase. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.908 |
ETK31380.1 | ETK30539.1 | MPTA5024_34985 | MPTA5024_39875 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Hypothetical protein. | 0.608 |
ETK31380.1 | ETK31373.1 | MPTA5024_34985 | MPTA5024_34950 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | UDP-N-acetylmuramate dehydrogenase. | 0.908 |
ETK31380.1 | pepA | MPTA5024_34985 | MPTA5024_10100 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.742 |
ETK31380.1 | pepA-2 | MPTA5024_34985 | MPTA5024_36310 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.770 |
ETK32540.1 | ETK30539.1 | MPTA5024_29365 | MPTA5024_39875 | Aminotransferase. | Hypothetical protein. | 0.727 |
ETK32540.1 | ETK33082.1 | MPTA5024_29365 | MPTA5024_26135 | Aminotransferase. | Aspartate aminotransferase. | 0.837 |
ETK32540.1 | pepA | MPTA5024_29365 | MPTA5024_10100 | Aminotransferase. | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.750 |
ETK32540.1 | pepA-2 | MPTA5024_29365 | MPTA5024_36310 | Aminotransferase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.750 |
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