STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG15294.1Signal peptidase I; Belongs to the peptidase S26 family. (172 aa)    
Predicted Functional Partners:
OJG15293.1
Hypothetical protein.
       0.746
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
 
 
 0.598
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.501
OJG14334.1
RNA polymerase sigma-54 factor.
  
  
 0.468
pyrD-2
Dihydroorotate dehydrogenase A; Catalyzes the conversion of dihydroorotate to orotate.
       0.463
OJG15057.1
RIP metalloprotease RseP.
 
  
 0.458
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.451
OJG16680.1
Hypothetical protein.
     
 0.445
OJG15292.1
Hypothetical protein.
       0.404
Your Current Organism:
Enterococcus canintestini
NCBI taxonomy Id: 317010
Other names: CCM 7285, CCUG 37857, CCUG 51312, DSM 21207, E. canintestini, Enterococcus canintestini Naser et al. 2005, Enterococcus sp. LMG 13590, LMG 13590, LMG:13590
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