Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KUG60349.1BioY family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
KUG60350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
KUG59968.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
KUG57868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KUG57534.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
KUG57533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.733
KUG60501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.450
KUG60348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
Your Current Organism:
Nesterenkonia jeotgali
NCBI taxonomy Id: 317018
Other names: JCM 12610, KCTC 19053, N. jeotgali, Nesterenkonia jeotgali Yoon et al. 2006, strain JG-241
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