STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_0523KEGG: aae:aq_1669 hypothetical protein. (168 aa)    
Predicted Functional Partners:
Tcr_0524
PFAM: outer membrane efflux protein; KEGG: eca:ECA1098 putative type I secretion protein.
 
     0.940
Tcr_0603
Thiosulfate-binding protein SoxY; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: cte:CT1017 sulfur oxidation protein SoxY.
 
   
 0.789
Tcr_0601
Diheme cytochrome SoxA (sulfur oxidation); KEGG: cte:CT1019 sulfur oxidation protein SoxA.
 
     0.783
Tcr_1549
Sulfate thiol esterase SoxB; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase 5'-Nucleotidase-like; KEGG: cte:CT1021 sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.782
Tcr_0602
Sulfur compound chelating protein SoxZ.
 
     0.777
Tcr_2158
CDF cation efflux transporter protein; KEGG: bja:blr3520 hypothetical protein.
 
     0.768
Tcr_2157
KEGG: bja:bll1008 hypothetical protein.
 
     0.729
Tcr_0604
Monoheme cytochrome SoxX (sulfur oxidation); PFAM: cytochrome c, class I; KEGG: cte:CT1016 sulfur oxidation protein SoxX.
  
     0.718
Tcr_1621
PFAM: beta-lactamase-like; KEGG: hypothetical protein.
  
     0.713
Tcr_0525
Membrane fusion protein; KEGG: pae:PA2389 conserved hypothetical protein.
       0.709
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.