STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_0557KEGG: pae:PA2985 hypothetical protein. (171 aa)    
Predicted Functional Partners:
Tcr_1694
KEGG: pae:PA4423 hypothetical protein.
  
     0.542
Tcr_0556
KEGG: vfi:VFA0504 hypothetical protein.
 
     0.516
Tcr_1482
KEGG: cvi:CV1906 hypothetical protein.
  
     0.463
Tcr_1362
KEGG: mca:MCA2036 hypothetical protein.
  
     0.453
Tcr_1335
KEGG: vfi:VFA0174 hypothetical protein.
  
     0.437
hflD
PFAM: protein of unknown function DUF489; KEGG: pst:PSPTO3359 hypothetical protein.
  
     0.412
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.