STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_0677Hypothetical protein. (128 aa)    
Predicted Functional Partners:
Tcr_0674
PFAM: protein of unknown function DUF847; KEGG: spt:SPA1608 hypothetical protein.
       0.773
Tcr_0675
Hypothetical protein.
       0.773
Tcr_0676
Hypothetical protein.
       0.773
Tcr_0678
Hypothetical protein.
       0.773
Tcr_0679
TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda; KEGG: ppu:PP3044 phage portal protein, lambda family.
       0.768
Tcr_0680
Protein C. Serine peptidase. MEROPS family S49; PFAM: peptidase S49; KEGG: probable bacteriophage-related protein.
       0.751
Tcr_0681
KEGG: ppu:PP3046 hypothetical protein.
       0.751
Tcr_0682
KEGG: eba:ebA7259 hypothetical protein.
       0.601
Tcr_0683
Hypothetical protein.
       0.447
Tcr_0684
Prophage minor tail protein Z homolog; KEGG: ppu:PP3049 hypothetical protein.
       0.447
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.