Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tcr_0932 | Tcr_0933 | Metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase-like; KEGG: tel:tlr1626 putative beta-lactamase-like protein. | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ftu:FTT1761 hypothetical protein. | 0.438 |
Tcr_0932 | Tcr_0934 | Metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase-like; KEGG: tel:tlr1626 putative beta-lactamase-like protein. | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | 0.418 |
Tcr_0933 | Tcr_0932 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ftu:FTT1761 hypothetical protein. | Metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase-like; KEGG: tel:tlr1626 putative beta-lactamase-like protein. | 0.438 |
Tcr_0933 | Tcr_0934 | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ftu:FTT1761 hypothetical protein. | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | 0.859 |
Tcr_0934 | Tcr_0932 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | Metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase-like; KEGG: tel:tlr1626 putative beta-lactamase-like protein. | 0.418 |
Tcr_0934 | Tcr_0933 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. | PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ftu:FTT1761 hypothetical protein. | 0.859 |