STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_0965Rhodanese family protein; PFAM: Rhodanese-like; KEGG: ttj:TTHA1028 thiosulfate sulfurtransferase. (290 aa)    
Predicted Functional Partners:
Tcr_2047
PFAM: Rhodanese-like; KEGG: hal:VNG2393G probable thiosulfate sulfurtransferase.
  
  
 
0.925
Tcr_0156
Sulfur dehydrogenase subunit SoxC; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding Mo-co oxidoreductase dimerisation domain; KEGG: bja:blr3516 probable sulfite oxidase molybdopterin subunit.
    
 0.913
Tcr_0157
Sulfur oxidation system protein SoxD; KEGG: rpa:RPA4463 possible cytochrome.
    
 0.910
Tcr_1893
PFAM: oxidoreductase FAD/NAD(P)-binding FAD-binding; KEGG: bha:BH0609 sulfite reductase (NADPH).
    
 0.910
Tcr_1549
Sulfate thiol esterase SoxB; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase 5'-Nucleotidase-like; KEGG: cte:CT1021 sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
    
 0.909
Tcr_0603
Thiosulfate-binding protein SoxY; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: cte:CT1017 sulfur oxidation protein SoxY.
     
 0.907
Tcr_0601
Diheme cytochrome SoxA (sulfur oxidation); KEGG: cte:CT1019 sulfur oxidation protein SoxA.
  
 
 0.906
Tcr_0602
Sulfur compound chelating protein SoxZ.
     
 0.905
Tcr_1755
PFAM: aminotransferase, class I and II; KEGG: aci:ACIAD2574 aspartate aminotransferase A.
     
 0.902
Tcr_0604
Monoheme cytochrome SoxX (sulfur oxidation); PFAM: cytochrome c, class I; KEGG: cte:CT1016 sulfur oxidation protein SoxX.
    
  0.900
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.