STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_1146KEGG: ppr:PBPRA2236 putative CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (195 aa)    
Predicted Functional Partners:
Tcr_0915
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
 
  
 0.948
Tcr_1280
PFAM: phosphatidate cytidylyltransferase; KEGG: pae:PA3651 phosphatidate cytidylyltransferase.
 
  
 0.947
Tcr_0610
KEGG: son:SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.935
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.720
Tcr_0621
KEGG: cvi:CV3539 hypothetical protein.
  
    0.698
Tcr_1943
KEGG: neu:NE1157 hypothetical protein.
  
    0.698
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sfx:S4121 glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.684
Tcr_0136
PFAM: molybdopterin binding domain; KEGG: eba:ebA4355 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
  
  
 0.604
Tcr_0070
long-chain-fatty-acid-CoA ligase of the AMP binding family; PFAM: AMP-dependent synthetase and ligase phospholipid/glycerol acyltransferase; KEGG: bja:bll2324 long-chain-fatty-acid--[acyl-carrier-protein] ligase / acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase.
  
 
 0.595
Tcr_1593
PFAM: CinA-like; KEGG: mca:MCA0385 competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
  
  
 0.578
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.