STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcr_1599Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (126 aa)    
Predicted Functional Partners:
Tcr_1280
PFAM: phosphatidate cytidylyltransferase; KEGG: pae:PA3651 phosphatidate cytidylyltransferase.
    
 0.915
Tcr_0357
PFAM: phospholipid/glycerol acyltransferase; KEGG: neu:NE1184 phospholipid and glycerol acyltransferase (from 'motifs_6.msf').
     
 0.906
Tcr_0224
KEGG: atc:AGR_C_3843 hypothetical protein.
     
  0.900
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase-like 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: sfx:S4121 glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.827
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.805
Tcr_1600
PFAM: metallophosphoesterase; KEGG: pae:PA3219 hypothetical protein.
       0.698
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.542
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
  
 0.515
Tcr_1601
PFAM: glycosyl transferase, group 1; KEGG: conserved hypothetical protein.
     
 0.451
Tcr_0070
long-chain-fatty-acid-CoA ligase of the AMP binding family; PFAM: AMP-dependent synthetase and ligase phospholipid/glycerol acyltransferase; KEGG: bja:bll2324 long-chain-fatty-acid--[acyl-carrier-protein] ligase / acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase.
     
 0.420
Your Current Organism:
Hydrogenovibrio crunogenus
NCBI taxonomy Id: 317025
Other names: H. crunogenus XCL-2, Hydrogenovibrio crunogenus XCL-2, Thiomicrospira crunogena XCL-2
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