Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tcr_0179 | selO | Tcr_0179 | Tcr_2019 | ATP-binding cassette superfamily transporter, permease component; PFAM: transport system permease protein; KEGG: gvi:gll0579 hemin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.495 |
Tcr_2020 | selO | Tcr_2020 | Tcr_2019 | ABC transporter permease protein homolog; PFAM: conserved hypothetical protein 245; KEGG: bja:blr8071 putative ABC transport system permease protein. | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.442 |
msrA | selO | Tcr_0783 | Tcr_2019 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.588 |
selO | Tcr_0179 | Tcr_2019 | Tcr_0179 | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | ATP-binding cassette superfamily transporter, permease component; PFAM: transport system permease protein; KEGG: gvi:gll0579 hemin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.495 |
selO | Tcr_2020 | Tcr_2019 | Tcr_2020 | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | ABC transporter permease protein homolog; PFAM: conserved hypothetical protein 245; KEGG: bja:blr8071 putative ABC transport system permease protein. | 0.442 |
selO | msrA | Tcr_2019 | Tcr_0783 | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.588 |