Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DFI_03115 | DFI_03365 | GCA_000419625_00517 | GCA_000419625_00466 | Two-component sensor histidine kinase. | Histidine kinase domain-containing protein. | 0.771 |
DFI_03115 | DFI_03370 | GCA_000419625_00517 | GCA_000419625_00465 | Two-component sensor histidine kinase. | DNA-binding response regulator. | 0.838 |
DFI_03115 | DFI_06135 | GCA_000419625_00517 | GCA_000419625_02691 | Two-component sensor histidine kinase. | Histidine kinase. | 0.588 |
DFI_03115 | DFI_08250 | GCA_000419625_00517 | GCA_000419625_02266 | Two-component sensor histidine kinase. | DNA-binding response regulator. | 0.835 |
DFI_03180 | DFI_03370 | GCA_000419625_00503 | GCA_000419625_00465 | Histidine kinase. | DNA-binding response regulator. | 0.840 |
DFI_03180 | DFI_06135 | GCA_000419625_00503 | GCA_000419625_02691 | Histidine kinase. | Histidine kinase. | 0.588 |
DFI_03180 | DFI_08250 | GCA_000419625_00503 | GCA_000419625_02266 | Histidine kinase. | DNA-binding response regulator. | 0.839 |
DFI_03365 | DFI_03115 | GCA_000419625_00466 | GCA_000419625_00517 | Histidine kinase domain-containing protein. | Two-component sensor histidine kinase. | 0.771 |
DFI_03365 | DFI_03370 | GCA_000419625_00466 | GCA_000419625_00465 | Histidine kinase domain-containing protein. | DNA-binding response regulator. | 0.967 |
DFI_03365 | DFI_06135 | GCA_000419625_00466 | GCA_000419625_02691 | Histidine kinase domain-containing protein. | Histidine kinase. | 0.588 |
DFI_03365 | DFI_08250 | GCA_000419625_00466 | GCA_000419625_02266 | Histidine kinase domain-containing protein. | DNA-binding response regulator. | 0.836 |
DFI_03365 | DFI_15130 | GCA_000419625_00466 | GCA_000419625_03780 | Histidine kinase domain-containing protein. | Two-component sensor histidine kinase. | 0.763 |
DFI_03370 | DFI_03115 | GCA_000419625_00465 | GCA_000419625_00517 | DNA-binding response regulator. | Two-component sensor histidine kinase. | 0.838 |
DFI_03370 | DFI_03180 | GCA_000419625_00465 | GCA_000419625_00503 | DNA-binding response regulator. | Histidine kinase. | 0.840 |
DFI_03370 | DFI_03365 | GCA_000419625_00465 | GCA_000419625_00466 | DNA-binding response regulator. | Histidine kinase domain-containing protein. | 0.967 |
DFI_03370 | DFI_04355 | GCA_000419625_00465 | GCA_000419625_00267 | DNA-binding response regulator. | Sensor histidine kinase. | 0.841 |
DFI_03370 | DFI_05450 | GCA_000419625_00465 | GCA_000419625_00059 | DNA-binding response regulator. | Sensor histidine kinase. | 0.841 |
DFI_03370 | DFI_06135 | GCA_000419625_00465 | GCA_000419625_02691 | DNA-binding response regulator. | Histidine kinase. | 0.806 |
DFI_03370 | DFI_08250 | GCA_000419625_00465 | GCA_000419625_02266 | DNA-binding response regulator. | DNA-binding response regulator. | 0.921 |
DFI_03370 | DFI_15130 | GCA_000419625_00465 | GCA_000419625_03780 | DNA-binding response regulator. | Two-component sensor histidine kinase. | 0.839 |
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