STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_07765Unannotated protein. (234 aa)    
Predicted Functional Partners:
PROH_06555
Unannotated protein.
    
 0.878
GCA_000332315_00374
Unannotated protein.
  
  
  0.864
PROH_11185
Unannotated protein.
    
 0.862
PROH_01355
Unannotated protein.
  
  
  0.853
PROH_20175
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.848
PROH_07770
Unannotated protein.
 
     0.834
PROH_08445
Unannotated protein.
    
 0.820
GCA_000332315_00417
Unannotated protein.
   
 
 0.803
PROH_07870
Unannotated protein.
 
 
 0.800
rpoA
Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.793
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.