Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000332315_00128 | PROH_07890 | GCA_000332315_00128 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.471 |
GCA_000332315_02736 | PROH_07890 | GCA_000332315_02736 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.457 |
PROH_03810 | PROH_07890 | GCA_000332315_00321 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.541 |
PROH_04275 | PROH_07890 | GCA_000332315_04138 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.466 |
PROH_05085 | PROH_07890 | GCA_000332315_04429 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.451 |
PROH_07890 | GCA_000332315_00128 | GCA_000332315_00320 | GCA_000332315_00128 | Unannotated protein. | Unannotated protein. | 0.471 |
PROH_07890 | GCA_000332315_02736 | GCA_000332315_00320 | GCA_000332315_02736 | Unannotated protein. | Unannotated protein. | 0.457 |
PROH_07890 | PROH_03810 | GCA_000332315_00320 | GCA_000332315_00321 | Unannotated protein. | Unannotated protein. | 0.541 |
PROH_07890 | PROH_04275 | GCA_000332315_00320 | GCA_000332315_04138 | Unannotated protein. | Unannotated protein. | 0.466 |
PROH_07890 | PROH_05085 | GCA_000332315_00320 | GCA_000332315_04429 | Unannotated protein. | Unannotated protein. | 0.451 |
PROH_07890 | PROH_17735 | GCA_000332315_00320 | GCA_000332315_01681 | Unannotated protein. | Unannotated protein. | 0.443 |
PROH_07890 | PROH_19260 | GCA_000332315_00320 | GCA_000332315_01325 | Unannotated protein. | Unannotated protein. | 0.540 |
PROH_07890 | sbcC | GCA_000332315_00320 | GCA_000332315_00558 | Unannotated protein. | Unannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily. | 0.449 |
PROH_17735 | PROH_07890 | GCA_000332315_01681 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.443 |
PROH_17735 | PROH_19260 | GCA_000332315_01681 | GCA_000332315_01325 | Unannotated protein. | Unannotated protein. | 0.953 |
PROH_17735 | sbcC | GCA_000332315_01681 | GCA_000332315_00558 | Unannotated protein. | Unannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily. | 0.771 |
PROH_19260 | PROH_07890 | GCA_000332315_01325 | GCA_000332315_00320 | Unannotated protein. | Unannotated protein. | 0.540 |
PROH_19260 | PROH_17735 | GCA_000332315_01325 | GCA_000332315_01681 | Unannotated protein. | Unannotated protein. | 0.953 |
PROH_19260 | sbcC | GCA_000332315_01325 | GCA_000332315_00558 | Unannotated protein. | Unannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily. | 0.776 |
sbcC | PROH_07890 | GCA_000332315_00558 | GCA_000332315_00320 | Unannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily. | Unannotated protein. | 0.449 |
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