node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplI | rplM | GCA_000332315_00904 | GCA_000332315_01820 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplI | rplO | GCA_000332315_00904 | GCA_000332315_01830 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplI | rplQ | GCA_000332315_00904 | GCA_000332315_01822 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein. | 0.999 |
rplI | rpsB | GCA_000332315_00904 | GCA_000332315_00838 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplI | rpsE | GCA_000332315_00904 | GCA_000332315_01831 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplI | rpsI | GCA_000332315_00904 | GCA_000332315_01819 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplI | rpsK | GCA_000332315_00904 | GCA_000332315_01824 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplI | rpsM | GCA_000332315_00904 | GCA_000332315_01825 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.997 |
rplI | rpsP | GCA_000332315_00904 | GCA_000332315_00581 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
rplI | secY | GCA_000332315_00904 | GCA_000332315_01829 | Unannotated protein; Binds to the 23S rRNA. | Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.986 |
rplM | rplI | GCA_000332315_01820 | GCA_000332315_00904 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Binds to the 23S rRNA. | 0.999 |
rplM | rplO | GCA_000332315_01820 | GCA_000332315_01830 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplM | rplQ | GCA_000332315_01820 | GCA_000332315_01822 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein. | 0.999 |
rplM | rpsB | GCA_000332315_01820 | GCA_000332315_00838 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplM | rpsE | GCA_000332315_01820 | GCA_000332315_01831 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplM | rpsI | GCA_000332315_01820 | GCA_000332315_01819 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsK | GCA_000332315_01820 | GCA_000332315_01824 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplM | rpsM | GCA_000332315_01820 | GCA_000332315_01825 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rplM | rpsP | GCA_000332315_01820 | GCA_000332315_00581 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
rplM | secY | GCA_000332315_01820 | GCA_000332315_01829 | Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Unannotated protein; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.998 |