STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_14225Unannotated protein; Belongs to the bacterial secretin family. (867 aa)    
Predicted Functional Partners:
PROH_14215
Unannotated protein.
 
 
 0.991
PROH_14210
Unannotated protein.
 
 
 0.975
PROH_14220
Unannotated protein.
 
 
 0.975
GCA_000332315_02907
Unannotated protein.
   
 
 0.961
PROH_17175
Unannotated protein.
 
 
 
 0.889
PROH_17185
Unannotated protein.
 
 
 
 0.874
PROH_09535
Unannotated protein.
 
 
 
 0.860
GCA_000332315_00522
Unannotated protein.
 
 
 
 0.843
PROH_08605
Unannotated protein.
   
 
 0.822
GCA_000332315_03542
Unannotated protein.
   
 
 0.822
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.