Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000332315_01010 | GCA_000332315_02721 | GCA_000332315_01010 | GCA_000332315_02721 | Unannotated protein. | Unannotated protein. | 0.688 |
GCA_000332315_01010 | GCA_000332315_03285 | GCA_000332315_01010 | GCA_000332315_03285 | Unannotated protein. | Unannotated protein. | 0.799 |
GCA_000332315_01010 | PROH_18225 | GCA_000332315_01010 | GCA_000332315_02531 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000332315_01010 | PROH_19515 | GCA_000332315_01010 | GCA_000332315_01380 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_000332315_01010 | PROH_20705 | GCA_000332315_01010 | GCA_000332315_03013 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_000332315_01010 | PROH_20710 | GCA_000332315_01010 | GCA_000332315_03014 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily. | 0.969 |
GCA_000332315_01010 | menA | GCA_000332315_01010 | GCA_000332315_00081 | Unannotated protein. | Unannotated protein; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily. | 0.624 |
GCA_000332315_01010 | menC | GCA_000332315_01010 | GCA_000332315_03012 | Unannotated protein. | Unannotated protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.533 |
GCA_000332315_01010 | menD | GCA_000332315_01010 | GCA_000332315_03137 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.497 |
GCA_000332315_02721 | GCA_000332315_01010 | GCA_000332315_02721 | GCA_000332315_01010 | Unannotated protein. | Unannotated protein. | 0.688 |
GCA_000332315_02721 | GCA_000332315_03285 | GCA_000332315_02721 | GCA_000332315_03285 | Unannotated protein. | Unannotated protein. | 0.811 |
GCA_000332315_02721 | GCA_000332315_03817 | GCA_000332315_02721 | GCA_000332315_03817 | Unannotated protein. | Unannotated protein. | 0.695 |
GCA_000332315_02721 | PROH_18225 | GCA_000332315_02721 | GCA_000332315_02531 | Unannotated protein. | Unannotated protein. | 0.562 |
GCA_000332315_02721 | PROH_19515 | GCA_000332315_02721 | GCA_000332315_01380 | Unannotated protein. | Unannotated protein. | 0.443 |
GCA_000332315_02721 | PROH_20705 | GCA_000332315_02721 | GCA_000332315_03013 | Unannotated protein. | Unannotated protein. | 0.918 |
GCA_000332315_02721 | PROH_20710 | GCA_000332315_02721 | GCA_000332315_03014 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily. | 0.801 |
GCA_000332315_02721 | menA | GCA_000332315_02721 | GCA_000332315_00081 | Unannotated protein. | Unannotated protein; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily. | 0.805 |
GCA_000332315_02721 | menC | GCA_000332315_02721 | GCA_000332315_03012 | Unannotated protein. | Unannotated protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.734 |
GCA_000332315_02721 | menD | GCA_000332315_02721 | GCA_000332315_03137 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.916 |
GCA_000332315_03285 | GCA_000332315_01010 | GCA_000332315_03285 | GCA_000332315_01010 | Unannotated protein. | Unannotated protein. | 0.799 |
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