Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PROH_03595 | PROH_11250 | GCA_000332315_03998 | GCA_000332315_01027 | Unannotated protein. | Unannotated protein. | 0.726 |
PROH_03595 | PROH_12075 | GCA_000332315_03998 | GCA_000332315_01204 | Unannotated protein. | Unannotated protein. | 0.746 |
PROH_03595 | PROH_16490 | GCA_000332315_03998 | GCA_000332315_02481 | Unannotated protein. | Unannotated protein. | 0.756 |
PROH_03595 | PROH_18025 | GCA_000332315_03998 | GCA_000332315_01739 | Unannotated protein. | Unannotated protein. | 0.820 |
PROH_03595 | PROH_20670 | GCA_000332315_03998 | GCA_000332315_03004 | Unannotated protein. | Unannotated protein. | 0.879 |
PROH_03595 | acsF | GCA_000332315_03998 | GCA_000332315_03058 | Unannotated protein. | Unannotated protein; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.957 |
PROH_03595 | acsF-2 | GCA_000332315_03998 | GCA_000332315_03166 | Unannotated protein. | Unannotated protein; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.959 |
PROH_03595 | chlB | GCA_000332315_03998 | GCA_000332315_03051 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.815 |
PROH_03595 | chlL | GCA_000332315_03998 | GCA_000332315_01764 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.817 |
PROH_03595 | chlN | GCA_000332315_03998 | GCA_000332315_01766 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.823 |
PROH_11250 | PROH_03595 | GCA_000332315_01027 | GCA_000332315_03998 | Unannotated protein. | Unannotated protein. | 0.726 |
PROH_11250 | PROH_16490 | GCA_000332315_01027 | GCA_000332315_02481 | Unannotated protein. | Unannotated protein. | 0.703 |
PROH_11250 | PROH_18025 | GCA_000332315_01027 | GCA_000332315_01739 | Unannotated protein. | Unannotated protein. | 0.699 |
PROH_11250 | PROH_20670 | GCA_000332315_01027 | GCA_000332315_03004 | Unannotated protein. | Unannotated protein. | 0.864 |
PROH_11250 | acsF | GCA_000332315_01027 | GCA_000332315_03058 | Unannotated protein. | Unannotated protein; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.851 |
PROH_11250 | acsF-2 | GCA_000332315_01027 | GCA_000332315_03166 | Unannotated protein. | Unannotated protein; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. | 0.849 |
PROH_11250 | chlB | GCA_000332315_01027 | GCA_000332315_03051 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.838 |
PROH_11250 | chlL | GCA_000332315_01027 | GCA_000332315_01764 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.800 |
PROH_11250 | chlN | GCA_000332315_01027 | GCA_000332315_01766 | Unannotated protein. | Unannotated protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex. | 0.823 |
PROH_12075 | PROH_03595 | GCA_000332315_01204 | GCA_000332315_03998 | Unannotated protein. | Unannotated protein. | 0.746 |
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