STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_01885Unannotated protein; Belongs to the ABC transporter superfamily. (411 aa)    
Predicted Functional Partners:
PROH_01505
Unannotated protein.
 0.977
PROH_01500
Unannotated protein.
 
 0.970
PROH_01900
Unannotated protein.
 
 0.938
PROH_17615
Unannotated protein.
 
 
 0.928
PROH_10320
Unannotated protein.
 
 0.891
GCA_000332315_00961
Unannotated protein.
 
 
 0.865
PROH_10405
Unannotated protein.
 
 
 0.863
PROH_13405
Unannotated protein.
 
 
0.842
PROH_02135
Unannotated protein.
 
 
    0.777
potA
Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
  
 
0.708
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.