STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_02755Unannotated protein. (303 aa)    
Predicted Functional Partners:
GCA_000332315_01010
Unannotated protein.
   
 0.983
GCA_000332315_00417
Unannotated protein.
  
 0.947
GCA_000332315_04092
Unannotated protein.
   
 0.834
GCA_000332315_04091
Unannotated protein.
   
 0.833
PROH_20175
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
  0.807
PROH_13155
Unannotated protein.
  
     0.728
PROH_11360
Unannotated protein.
    
  0.720
PROH_14700
Unannotated protein.
    
  0.720
PROH_19055
Unannotated protein.
    
  0.720
GCA_000332315_02830
Unannotated protein.
    
  0.720
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.