STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332315_03761Unannotated protein. (222 aa)    
Predicted Functional Partners:
GCA_000332315_03762
Unannotated protein.
 
 
  0.859
PROH_08400
Unannotated protein.
  
   0.808
GCA_000332315_00701
Unannotated protein.
 
 
  0.753
PROH_17095
Unannotated protein.
  
   0.739
PROH_01610
Unannotated protein.
 
      0.698
GCA_000332315_02628
Unannotated protein.
 
 
 
  0.593
GCA_000332315_03760
Unannotated protein.
       0.527
GCA_000332315_01336
Unannotated protein.
 
 
  0.465
GCA_000332315_03822
Unannotated protein.
    
  0.404
GCA_000332315_04625
Unannotated protein.
 
 
 
  0.403
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.