STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_04070Unannotated protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (119 aa)    
Predicted Functional Partners:
GCA_000332315_03579
Unannotated protein.
   
    0.768
PROH_07855
Unannotated protein.
    
 0.732
PROH_12830
Unannotated protein.
   
 0.703
PROH_00315
Unannotated protein.
   
   0.560
GCA_000332315_03822
Unannotated protein.
    
   0.542
PROH_11060
Unannotated protein.
  
 
  0.474
PROH_16870
Unannotated protein.
  
 
  0.474
GCA_000332315_01721
Unannotated protein.
  
 
  0.474
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.