STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROH_13190Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000332315_00417
Unannotated protein.
    
 0.897
GCA_000332315_01010
Unannotated protein.
    
 0.840
GCA_000332315_04092
Unannotated protein.
    
 0.788
PROH_18755
Unannotated protein; Belongs to the cytochrome P450 family.
    
  0.698
PROH_01805
Unannotated protein; Belongs to the cytochrome P450 family.
    
  0.698
gcvP
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.692
GCA_000332315_02734
Unannotated protein.
  
     0.626
PROH_17385
Unannotated protein.
  
 
  0.594
PROH_17875
Unannotated protein.
  
     0.585
PROH_18810
Unannotated protein.
  
     0.577
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.