STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332315_04629Unannotated protein. (478 aa)    
Predicted Functional Partners:
GCA_000332315_02872
Unannotated protein.
   
 0.948
PROH_07905
Unannotated protein.
 
      0.897
PROH_12265
Unannotated protein.
 
     0.891
GCA_000332315_03404
Unannotated protein.
 
   
  0.881
PROH_05410
Unannotated protein.
 
     0.866
GCA_000332315_04115
Unannotated protein.
   
 0.862
GCA_000332315_03403
Unannotated protein.
 
      0.851
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
 0.842
PROH_06555
Unannotated protein.
    
 0.834
PROH_11185
Unannotated protein.
    
 0.834
Your Current Organism:
Prochlorothrix hollandica
NCBI taxonomy Id: 317619
Other names: P. hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica CCMP34, Prochlorothrix hollandica CCMP682, Prochlorothrix hollandica LI-2 ACC15-2, Prochlorothrix hollandica PCC 9006, Prochlorothrix hollandica PCC 9006 = CALU 1027, Prochlorothrix hollandica PCT-31, Prochlorothrix hollandica SAG 10.89
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.