Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sala_0308 | Sala_0309 | Sala_0308 | Sala_0309 | Iron-containing alcohol dehydrogenase. | Putative lipoprotein signal peptide. | 0.608 |
Sala_0308 | Sala_0310 | Sala_0308 | Sala_0310 | Iron-containing alcohol dehydrogenase. | Transcriptional regulator, XRE family. | 0.455 |
Sala_0309 | Sala_0308 | Sala_0309 | Sala_0308 | Putative lipoprotein signal peptide. | Iron-containing alcohol dehydrogenase. | 0.608 |
Sala_0309 | Sala_0310 | Sala_0309 | Sala_0310 | Putative lipoprotein signal peptide. | Transcriptional regulator, XRE family. | 0.565 |
Sala_0309 | Sala_0311 | Sala_0309 | Sala_0311 | Putative lipoprotein signal peptide. | Transcriptional regulator, XRE family. | 0.404 |
Sala_0309 | nnrE | Sala_0309 | Sala_1191 | Putative lipoprotein signal peptide. | YjeF-related protein-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | 0.450 |
Sala_0310 | Sala_0308 | Sala_0310 | Sala_0308 | Transcriptional regulator, XRE family. | Iron-containing alcohol dehydrogenase. | 0.455 |
Sala_0310 | Sala_0309 | Sala_0310 | Sala_0309 | Transcriptional regulator, XRE family. | Putative lipoprotein signal peptide. | 0.565 |
Sala_0310 | Sala_0311 | Sala_0310 | Sala_0311 | Transcriptional regulator, XRE family. | Transcriptional regulator, XRE family. | 0.670 |
Sala_0311 | Sala_0309 | Sala_0311 | Sala_0309 | Transcriptional regulator, XRE family. | Putative lipoprotein signal peptide. | 0.404 |
Sala_0311 | Sala_0310 | Sala_0311 | Sala_0310 | Transcriptional regulator, XRE family. | Transcriptional regulator, XRE family. | 0.670 |
nnrE | Sala_0309 | Sala_1191 | Sala_0309 | YjeF-related protein-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | Putative lipoprotein signal peptide. | 0.450 |