Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sala_0469 | Sala_0470 | Transglycosylase-associated protein. | Transglycosylase-associated protein. | 0.521 |
Sala_0469 | Sala_1015 | Transglycosylase-associated protein. | TonB-dependent receptor. | 0.486 |
Sala_0469 | Sala_1133 | Transglycosylase-associated protein. | Protein of unknown function DUF1508. | 0.482 |
Sala_0469 | Sala_1429 | Transglycosylase-associated protein. | Conserved hypothetical protein. | 0.626 |
Sala_0469 | Sala_1434 | Transglycosylase-associated protein. | CsbD-like protein; Belongs to the UPF0337 (CsbD) family. | 0.417 |
Sala_0469 | Sala_2167 | Transglycosylase-associated protein. | General stress protein. | 0.510 |
Sala_0469 | Sala_3088 | Transglycosylase-associated protein. | Conserved hypothetical protein. | 0.487 |
Sala_0470 | Sala_0469 | Transglycosylase-associated protein. | Transglycosylase-associated protein. | 0.521 |
Sala_0470 | Sala_1015 | Transglycosylase-associated protein. | TonB-dependent receptor. | 0.419 |
Sala_0470 | Sala_1133 | Transglycosylase-associated protein. | Protein of unknown function DUF1508. | 0.558 |
Sala_0470 | Sala_1429 | Transglycosylase-associated protein. | Conserved hypothetical protein. | 0.635 |
Sala_0470 | Sala_1434 | Transglycosylase-associated protein. | CsbD-like protein; Belongs to the UPF0337 (CsbD) family. | 0.417 |
Sala_0470 | Sala_2167 | Transglycosylase-associated protein. | General stress protein. | 0.439 |
Sala_0470 | Sala_3088 | Transglycosylase-associated protein. | Conserved hypothetical protein. | 0.487 |
Sala_1015 | Sala_0469 | TonB-dependent receptor. | Transglycosylase-associated protein. | 0.486 |
Sala_1015 | Sala_0470 | TonB-dependent receptor. | Transglycosylase-associated protein. | 0.419 |
Sala_1015 | Sala_1429 | TonB-dependent receptor. | Conserved hypothetical protein. | 0.473 |
Sala_1133 | Sala_0469 | Protein of unknown function DUF1508. | Transglycosylase-associated protein. | 0.482 |
Sala_1133 | Sala_0470 | Protein of unknown function DUF1508. | Transglycosylase-associated protein. | 0.558 |
Sala_1429 | Sala_0469 | Conserved hypothetical protein. | Transglycosylase-associated protein. | 0.626 |
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