Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sala_0987 | tatA | Sala_0987 | Sala_1143 | Rhomboid-like protein. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.807 |
Sala_0987 | tatB | Sala_0987 | Sala_1144 | Rhomboid-like protein. | Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.771 |
Sala_1139 | Sala_1140 | Sala_1139 | Sala_1140 | Sporulation related. | Beta-N-acetylhexosaminidase. | 0.697 |
Sala_1139 | Sala_1141 | Sala_1139 | Sala_1141 | Sporulation related. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.692 |
Sala_1139 | Sala_1142 | Sala_1139 | Sala_1142 | Sporulation related. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.690 |
Sala_1139 | argS-2 | Sala_1139 | Sala_1138 | Sporulation related. | arginyl-tRNA synthetase. | 0.811 |
Sala_1139 | tatA | Sala_1139 | Sala_1143 | Sporulation related. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.633 |
Sala_1139 | tatB | Sala_1139 | Sala_1144 | Sporulation related. | Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.571 |
Sala_1139 | tatC | Sala_1139 | Sala_1145 | Sporulation related. | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.563 |
Sala_1140 | Sala_1139 | Sala_1140 | Sala_1139 | Beta-N-acetylhexosaminidase. | Sporulation related. | 0.697 |
Sala_1140 | Sala_1141 | Sala_1140 | Sala_1141 | Beta-N-acetylhexosaminidase. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.867 |
Sala_1140 | Sala_1142 | Sala_1140 | Sala_1142 | Beta-N-acetylhexosaminidase. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.862 |
Sala_1140 | argS-2 | Sala_1140 | Sala_1138 | Beta-N-acetylhexosaminidase. | arginyl-tRNA synthetase. | 0.599 |
Sala_1140 | tatA | Sala_1140 | Sala_1143 | Beta-N-acetylhexosaminidase. | Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.806 |
Sala_1140 | tatB | Sala_1140 | Sala_1144 | Beta-N-acetylhexosaminidase. | Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.779 |
Sala_1140 | tatC | Sala_1140 | Sala_1145 | Beta-N-acetylhexosaminidase. | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.747 |
Sala_1141 | Sala_1139 | Sala_1141 | Sala_1139 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Sporulation related. | 0.692 |
Sala_1141 | Sala_1140 | Sala_1141 | Sala_1140 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Beta-N-acetylhexosaminidase. | 0.867 |
Sala_1141 | Sala_1142 | Sala_1141 | Sala_1142 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
Sala_1141 | argS-2 | Sala_1141 | Sala_1138 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | arginyl-tRNA synthetase. | 0.611 |
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