Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sala_1235 | Sala_1236 | Sala_1235 | Sala_1236 | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Protein of unknown function DUF559. | 0.781 |
Sala_1235 | Sala_1237 | Sala_1235 | Sala_1237 | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Dihydrolipoamide dehydrogenase. | 0.998 |
Sala_1235 | Sala_1238 | Sala_1235 | Sala_1238 | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Amidohydrolase. | 0.547 |
Sala_1236 | Sala_1235 | Sala_1236 | Sala_1235 | Protein of unknown function DUF559. | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.781 |
Sala_1236 | Sala_1237 | Sala_1236 | Sala_1237 | Protein of unknown function DUF559. | Dihydrolipoamide dehydrogenase. | 0.786 |
Sala_1236 | Sala_1238 | Sala_1236 | Sala_1238 | Protein of unknown function DUF559. | Amidohydrolase. | 0.541 |
Sala_1237 | Sala_1235 | Sala_1237 | Sala_1235 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.998 |
Sala_1237 | Sala_1236 | Sala_1237 | Sala_1236 | Dihydrolipoamide dehydrogenase. | Protein of unknown function DUF559. | 0.786 |
Sala_1237 | Sala_1238 | Sala_1237 | Sala_1238 | Dihydrolipoamide dehydrogenase. | Amidohydrolase. | 0.550 |
Sala_1238 | Sala_1235 | Sala_1238 | Sala_1235 | Amidohydrolase. | Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.547 |
Sala_1238 | Sala_1236 | Sala_1238 | Sala_1236 | Amidohydrolase. | Protein of unknown function DUF559. | 0.541 |
Sala_1238 | Sala_1237 | Sala_1238 | Sala_1237 | Amidohydrolase. | Dihydrolipoamide dehydrogenase. | 0.550 |
Sala_1238 | Sala_1334 | Sala_1238 | Sala_1334 | Amidohydrolase. | N-formylglutamate amidohydrolase. | 0.406 |
Sala_1238 | Sala_1690 | Sala_1238 | Sala_1690 | Amidohydrolase. | N-formylglutamate amidohydrolase. | 0.406 |
Sala_1238 | Sala_2007 | Sala_1238 | Sala_2007 | Amidohydrolase. | Peptidase S9, prolyl oligopeptidase active site region. | 0.522 |
Sala_1238 | hutH | Sala_1238 | Sala_1689 | Amidohydrolase. | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | 0.554 |
Sala_1238 | hutU | Sala_1238 | Sala_1691 | Amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.554 |
Sala_1334 | Sala_1238 | Sala_1334 | Sala_1238 | N-formylglutamate amidohydrolase. | Amidohydrolase. | 0.406 |
Sala_1334 | hutH | Sala_1334 | Sala_1689 | N-formylglutamate amidohydrolase. | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | 0.443 |
Sala_1334 | hutU | Sala_1334 | Sala_1691 | N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.472 |
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