Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sala_0354 | Sala_1647 | Sala_0354 | Sala_1647 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.421 |
Sala_1645 | Sala_1646 | Sala_1645 | Sala_1646 | Twin-arginine translocation pathway signal. | Uncharacterized conserved protein UCP016719. | 0.772 |
Sala_1645 | Sala_1647 | Sala_1645 | Sala_1647 | Twin-arginine translocation pathway signal. | Conserved hypothetical protein. | 0.772 |
Sala_1645 | Sala_1648 | Sala_1645 | Sala_1648 | Twin-arginine translocation pathway signal. | Excinuclease ABC, C subunit-like protein. | 0.762 |
Sala_1645 | Sala_1650 | Sala_1645 | Sala_1650 | Twin-arginine translocation pathway signal. | Type IV pilus assembly PilZ. | 0.422 |
Sala_1645 | tyrS | Sala_1645 | Sala_1649 | Twin-arginine translocation pathway signal. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.629 |
Sala_1646 | Sala_1645 | Sala_1646 | Sala_1645 | Uncharacterized conserved protein UCP016719. | Twin-arginine translocation pathway signal. | 0.772 |
Sala_1646 | Sala_1647 | Sala_1646 | Sala_1647 | Uncharacterized conserved protein UCP016719. | Conserved hypothetical protein. | 0.963 |
Sala_1646 | Sala_1648 | Sala_1646 | Sala_1648 | Uncharacterized conserved protein UCP016719. | Excinuclease ABC, C subunit-like protein. | 0.773 |
Sala_1646 | Sala_1650 | Sala_1646 | Sala_1650 | Uncharacterized conserved protein UCP016719. | Type IV pilus assembly PilZ. | 0.437 |
Sala_1646 | tyrS | Sala_1646 | Sala_1649 | Uncharacterized conserved protein UCP016719. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.641 |
Sala_1647 | Sala_0354 | Sala_1647 | Sala_0354 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.421 |
Sala_1647 | Sala_1645 | Sala_1647 | Sala_1645 | Conserved hypothetical protein. | Twin-arginine translocation pathway signal. | 0.772 |
Sala_1647 | Sala_1646 | Sala_1647 | Sala_1646 | Conserved hypothetical protein. | Uncharacterized conserved protein UCP016719. | 0.963 |
Sala_1647 | Sala_1648 | Sala_1647 | Sala_1648 | Conserved hypothetical protein. | Excinuclease ABC, C subunit-like protein. | 0.773 |
Sala_1647 | Sala_1650 | Sala_1647 | Sala_1650 | Conserved hypothetical protein. | Type IV pilus assembly PilZ. | 0.438 |
Sala_1647 | Sala_2533 | Sala_1647 | Sala_2533 | Conserved hypothetical protein. | Asparagine synthase. | 0.403 |
Sala_1647 | tyrS | Sala_1647 | Sala_1649 | Conserved hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.641 |
Sala_1648 | Sala_1645 | Sala_1648 | Sala_1645 | Excinuclease ABC, C subunit-like protein. | Twin-arginine translocation pathway signal. | 0.762 |
Sala_1648 | Sala_1646 | Sala_1648 | Sala_1646 | Excinuclease ABC, C subunit-like protein. | Uncharacterized conserved protein UCP016719. | 0.773 |
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