STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sala_1844Amidohydrolase 3. (554 aa)    
Predicted Functional Partners:
Sala_1843
6-phosphogluconate dehydrogenase, NAD-binding.
       0.854
Sala_1845
FAD dependent oxidoreductase.
  
    0.783
Sala_1467
N-acyl-D-amino-acid deacylase.
     0.669
Sala_2007
Peptidase S9, prolyl oligopeptidase active site region.
 
     0.551
Sala_1846
(S)-2-hydroxy-acid oxidase.
       0.515
Sala_1413
Amidohydrolase.
  
     0.400
Sala_1842
L-threonine ammonia-lyase.
       0.400
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.