Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Sala_2007Peptidase S9, prolyl oligopeptidase active site region. (720 aa)    
Predicted Functional Partners:
Sala_2008
Phosphoribosyltransferase.
  
    0.768
Sala_2009
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
       0.760
Sala_2825
Amidohydrolase.
 
     0.564
Sala_0270
Peptidase S10, serine carboxypeptidase.
  
     0.556
Sala_1844
Amidohydrolase 3.
 
     0.552
Sala_1238
Amidohydrolase.
 
     0.523
Sala_0935
Amidohydrolase.
 
     0.510
Sala_1413
Amidohydrolase.
 
     0.509
Sala_2882
TonB-dependent receptor.
  
     0.471
Sala_1031
Peptidase M28.
 
    0.450
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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