Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Sala_2139Hypothetical protein. (377 aa)    
Predicted Functional Partners:
Sala_2138
Glutamate synthase (NADPH) small subunit.
       0.814
Sala_2140
Glutamate synthase (NADPH) large subunit.
       0.806
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.613
Sala_2141
Hypothetical protein.
       0.485
Sala_2136
3-beta hydroxysteroid dehydrogenase/isomerase.
       0.482
Sala_3001
Phosphomannomutase.
  
    0.438
Sala_0356
BolA-like protein; Belongs to the BolA/IbaG family.
  
    0.428
Sala_0647
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
  
    0.428
Sala_2142
Glutathione S-transferase-like protein.
       0.418
Sala_0374
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.416
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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