STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sala_2161MaoC-like dehydratase. (152 aa)    
Predicted Functional Partners:
Sala_2162
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.841
Sala_2132
Alcohol dehydrogenase, zinc-binding.
 
 0.799
Sala_1716
Alcohol dehydrogenase, zinc-binding.
 
 0.695
Sala_3077
acyl-CoA dehydrogenase-like protein.
 
 0.647
Sala_3068
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.619
Sala_2163
Carboxymuconolactone decarboxylase.
       0.610
Sala_2164
Antibiotic biosynthesis monooxygenase.
       0.575
Sala_1221
methylmalonyl-CoA mutase; N-terminal domain.
  
  
 0.567
Sala_1185
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.555
Sala_0858
Alcohol dehydrogenase, zinc-binding.
 
 0.547
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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