STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sala_3036PfkB. (342 aa)    
Predicted Functional Partners:
Sala_0192
2-keto-3-deoxy-phosphogluconate aldolase.
 
 0.974
Sala_3035
2-deoxy-D-gluconate 3-dehydrogenase.
 
 0.949
Sala_3043
D-altronate dehydratase.
 
  
 0.932
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.908
Sala_3128
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.870
Sala_3037
Carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family.
 
    0.853
Sala_0867
Short-chain dehydrogenase/reductase SDR.
  
 0.831
Sala_3079
Short-chain dehydrogenase/reductase SDR.
  
 0.831
Sala_0744
2-keto-3-deoxy-phosphogalactonate aldolase.
 
  
 0.785
Sala_3034
Protein of unknown function DUF1124, sugar phosphate isomerase putative.
 
  
 0.773
Your Current Organism:
Sphingopyxis alaskensis
NCBI taxonomy Id: 317655
Other names: S. alaskensis RB2256, Sphingopyxis alaskensis RB2256, Sphingopyxis alaskensis str. RB2256, Sphingopyxis alaskensis strain RB2256
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