Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sala_1137 | Sala_2056 | Sala_1137 | Sala_2056 | Conserved hypothetical protein. | Hypothetical protein. | 0.615 |
Sala_1137 | Sala_2178 | Sala_1137 | Sala_2178 | Conserved hypothetical protein. | Fatty acid desaturase. | 0.482 |
Sala_1137 | Sala_3178 | Sala_1137 | Sala_3178 | Conserved hypothetical protein. | Methyltransferase type 11. | 0.479 |
Sala_2056 | Sala_1137 | Sala_2056 | Sala_1137 | Hypothetical protein. | Conserved hypothetical protein. | 0.615 |
Sala_2056 | Sala_2178 | Sala_2056 | Sala_2178 | Hypothetical protein. | Fatty acid desaturase. | 0.405 |
Sala_2056 | Sala_3178 | Sala_2056 | Sala_3178 | Hypothetical protein. | Methyltransferase type 11. | 0.425 |
Sala_2178 | Sala_1137 | Sala_2178 | Sala_1137 | Fatty acid desaturase. | Conserved hypothetical protein. | 0.482 |
Sala_2178 | Sala_2056 | Sala_2178 | Sala_2056 | Fatty acid desaturase. | Hypothetical protein. | 0.405 |
Sala_2178 | Sala_3136 | Sala_2178 | Sala_3136 | Fatty acid desaturase. | C-5 sterol desaturase. | 0.427 |
Sala_2178 | Sala_3178 | Sala_2178 | Sala_3178 | Fatty acid desaturase. | Methyltransferase type 11. | 0.466 |
Sala_2311 | Sala_3178 | Sala_2311 | Sala_3178 | Conserved hypothetical protein. | Methyltransferase type 11. | 0.417 |
Sala_3136 | Sala_2178 | Sala_3136 | Sala_2178 | C-5 sterol desaturase. | Fatty acid desaturase. | 0.427 |
Sala_3136 | Sala_3178 | Sala_3136 | Sala_3178 | C-5 sterol desaturase. | Methyltransferase type 11. | 0.411 |
Sala_3174 | Sala_3175 | Sala_3174 | Sala_3175 | FAD-linked oxidoreductase. | Threonine aldolase family protein. | 0.833 |
Sala_3174 | Sala_3176 | Sala_3174 | Sala_3176 | FAD-linked oxidoreductase. | Glycosyl transferase, family 51. | 0.588 |
Sala_3174 | Sala_3178 | Sala_3174 | Sala_3178 | FAD-linked oxidoreductase. | Methyltransferase type 11. | 0.446 |
Sala_3174 | prfB | Sala_3174 | Sala_3177 | FAD-linked oxidoreductase. | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.436 |
Sala_3175 | Sala_3174 | Sala_3175 | Sala_3174 | Threonine aldolase family protein. | FAD-linked oxidoreductase. | 0.833 |
Sala_3175 | Sala_3176 | Sala_3175 | Sala_3176 | Threonine aldolase family protein. | Glycosyl transferase, family 51. | 0.581 |
Sala_3175 | Sala_3178 | Sala_3175 | Sala_3178 | Threonine aldolase family protein. | Methyltransferase type 11. | 0.527 |
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