Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG27018.1 | OJG27019.1 | RU98_GL003109 | RU98_GL003110 | GcvH family protein. | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | 0.986 |
OJG27018.1 | OJG28611.1 | RU98_GL003109 | RU98_GL000204 | GcvH family protein. | Hypothetical protein. | 0.642 |
OJG27019.1 | OJG27018.1 | RU98_GL003110 | RU98_GL003109 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | GcvH family protein. | 0.986 |
OJG27019.1 | OJG27331.1 | RU98_GL003110 | RU98_GL002783 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Regulatory protein spx; Belongs to the ArsC family. | 0.551 |
OJG27019.1 | OJG28611.1 | RU98_GL003110 | RU98_GL000204 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Hypothetical protein. | 0.642 |
OJG27019.1 | spxA | RU98_GL003110 | RU98_GL000208 | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | Regulatory protein spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. | 0.461 |
OJG27331.1 | OJG27019.1 | RU98_GL002783 | RU98_GL003110 | Regulatory protein spx; Belongs to the ArsC family. | spx/MgsR family transcriptional regulator; Belongs to the ArsC family. | 0.551 |
OJG27331.1 | OJG28610.1 | RU98_GL002783 | RU98_GL000203 | Regulatory protein spx; Belongs to the ArsC family. | Hypothetical protein. | 0.598 |
OJG27331.1 | OJG28611.1 | RU98_GL002783 | RU98_GL000204 | Regulatory protein spx; Belongs to the ArsC family. | Hypothetical protein. | 0.828 |
OJG27842.1 | OJG28611.1 | RU98_GL002051 | RU98_GL000204 | Hypothetical protein. | Hypothetical protein. | 0.637 |
OJG27842.1 | mecA | RU98_GL002051 | RU98_GL000207 | Hypothetical protein. | Adapter protein mecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. | 0.422 |
OJG28607.1 | OJG28609.1 | RU98_GL000200 | RU98_GL000202 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.882 |
OJG28607.1 | OJG28610.1 | RU98_GL000200 | RU98_GL000203 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.560 |
OJG28607.1 | OJG28611.1 | RU98_GL000200 | RU98_GL000204 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.652 |
OJG28607.1 | nadK | RU98_GL000200 | RU98_GL000201 | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.890 |
OJG28609.1 | OJG28607.1 | RU98_GL000202 | RU98_GL000200 | Hypothetical protein. | RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.882 |
OJG28609.1 | OJG28610.1 | RU98_GL000202 | RU98_GL000203 | Hypothetical protein. | Hypothetical protein. | 0.630 |
OJG28609.1 | OJG28611.1 | RU98_GL000202 | RU98_GL000204 | Hypothetical protein. | Hypothetical protein. | 0.752 |
OJG28609.1 | nadK | RU98_GL000202 | RU98_GL000201 | Hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.904 |
OJG28610.1 | OJG27331.1 | RU98_GL000203 | RU98_GL002783 | Hypothetical protein. | Regulatory protein spx; Belongs to the ArsC family. | 0.598 |
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