STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG26550.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
OJG26548.1
Hypothetical protein.
       0.821
OJG26549.1
Hypothetical protein.
       0.814
OJG27328.1
Hypothetical protein.
 
     0.621
OJG24295.1
Chitinase family 2 protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.609
OJG25466.1
Hypothetical protein.
  
     0.581
OJG25893.1
NAD-dependent deacetylase.
 
 
  0.500
OJG28684.1
Hypothetical protein.
 
     0.490
birA
biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.465
OJG27690.1
Hypothetical protein.
  
     0.464
OJG28412.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.452
Your Current Organism:
Enterococcus caccae
NCBI taxonomy Id: 317735
Other names: CCUG 51564, E. caccae, Enterococcus caccae Carvalho et al. 2006, strain 2215-02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.