STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG25894.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
OJG24908.1
Pheromone cAD1 lipoprotein.
  
    0.716
OJG24738.1
Hypothetical protein.
  
     0.610
OJG27289.1
Hypothetical protein.
  
     0.600
OJG28738.1
Hypothetical protein.
  
     0.590
OJG23169.1
TetR family transcriptional regulator.
  
     0.588
OJG26887.1
Hypothetical protein.
  
     0.588
OJG25264.1
Hypothetical protein.
  
     0.579
OJG28156.1
CBS domain-containing protein.
  
     0.571
OJG25455.1
Fimbrial isopeptide formation D2 domain-containing protein.
  
     0.570
OJG25893.1
NAD-dependent deacetylase.
 
     0.568
Your Current Organism:
Enterococcus caccae
NCBI taxonomy Id: 317735
Other names: CCUG 51564, E. caccae, Enterococcus caccae Carvalho et al. 2006, strain 2215-02
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.