Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG25473.1 | OJG25474.1 | RU98_GL001018 | RU98_GL001019 | Lipoyltransferase and lipoate-protein ligase. | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | 0.872 |
OJG25473.1 | OJG25475.1 | RU98_GL001018 | RU98_GL001020 | Lipoyltransferase and lipoate-protein ligase. | Hypothetical protein. | 0.874 |
OJG25473.1 | OJG25476.1 | RU98_GL001018 | RU98_GL001021 | Lipoyltransferase and lipoate-protein ligase. | YaeC family lipoprotein. | 0.861 |
OJG25473.1 | OJG26240.1 | RU98_GL001018 | RU98_GL000742 | Lipoyltransferase and lipoate-protein ligase. | Dihydrolipoamide acetyltransferase. | 0.932 |
OJG25473.1 | OJG26241.1 | RU98_GL001018 | RU98_GL000743 | Lipoyltransferase and lipoate-protein ligase. | Dihydrolipoyl dehydrogenase. | 0.861 |
OJG25473.1 | OJG27018.1 | RU98_GL001018 | RU98_GL003109 | Lipoyltransferase and lipoate-protein ligase. | GcvH family protein. | 0.847 |
OJG25473.1 | OJG27237.1 | RU98_GL001018 | RU98_GL002689 | Lipoyltransferase and lipoate-protein ligase. | Dihydrolipoyl dehydrogenase. | 0.801 |
OJG25473.1 | OJG28789.1 | RU98_GL001018 | RU98_GL000382 | Lipoyltransferase and lipoate-protein ligase. | Lipoyltransferase and lipoate-protein ligase. | 0.972 |
OJG25473.1 | gcvH | RU98_GL001018 | RU98_GL002692 | Lipoyltransferase and lipoate-protein ligase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.846 |
OJG25473.1 | lipL | RU98_GL001018 | RU98_GL001590 | Lipoyltransferase and lipoate-protein ligase. | Lipoate-protein ligase A; Catalyzes the amidotransfer (transamidation) of the lipoyl moiety from lipoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes. Takes part in a pathway for scavenging of lipoic acid; Belongs to the octanoyltransferase LipL family. | 0.966 |
OJG25474.1 | OJG25473.1 | RU98_GL001019 | RU98_GL001018 | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | Lipoyltransferase and lipoate-protein ligase. | 0.872 |
OJG25474.1 | OJG25475.1 | RU98_GL001019 | RU98_GL001020 | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | Hypothetical protein. | 0.999 |
OJG25474.1 | OJG25476.1 | RU98_GL001019 | RU98_GL001021 | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | YaeC family lipoprotein. | 0.999 |
OJG25475.1 | OJG25473.1 | RU98_GL001020 | RU98_GL001018 | Hypothetical protein. | Lipoyltransferase and lipoate-protein ligase. | 0.874 |
OJG25475.1 | OJG25474.1 | RU98_GL001020 | RU98_GL001019 | Hypothetical protein. | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | 0.999 |
OJG25475.1 | OJG25476.1 | RU98_GL001020 | RU98_GL001021 | Hypothetical protein. | YaeC family lipoprotein. | 0.999 |
OJG25476.1 | OJG25473.1 | RU98_GL001021 | RU98_GL001018 | YaeC family lipoprotein. | Lipoyltransferase and lipoate-protein ligase. | 0.861 |
OJG25476.1 | OJG25474.1 | RU98_GL001021 | RU98_GL001019 | YaeC family lipoprotein. | Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. | 0.999 |
OJG25476.1 | OJG25475.1 | RU98_GL001021 | RU98_GL001020 | YaeC family lipoprotein. | Hypothetical protein. | 0.999 |
OJG26240.1 | OJG25473.1 | RU98_GL000742 | RU98_GL001018 | Dihydrolipoamide acetyltransferase. | Lipoyltransferase and lipoate-protein ligase. | 0.932 |
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