STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG28080.1ABC transporter ATP-binding protein. (219 aa)    
Predicted Functional Partners:
OJG28079.1
Hypothetical protein.
 
 0.974
OJG26999.1
Hypothetical protein.
  
 0.959
OJG27775.1
Hypothetical protein.
  
 0.934
OJG27162.1
Hypothetical protein.
 
 0.916
OJG26856.1
Hypothetical protein.
 
  0.902
OJG27791.1
Hypothetical protein.
 0.890
OJG26552.1
Permease.
  0.779
OJG28442.1
Hypothetical protein.
 0.768
OJG28361.1
Hypothetical protein.
 0.711
OJG25946.1
Hypothetical protein.
 0.692
Your Current Organism:
Enterococcus caccae
NCBI taxonomy Id: 317735
Other names: CCUG 51564, E. caccae, Enterococcus caccae Carvalho et al. 2006, strain 2215-02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.