Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG27600.1 | OJG28170.1 | RU98_GL002303 | RU98_GL001418 | Hypothetical protein. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.402 |
OJG28169.1 | OJG28170.1 | RU98_GL001417 | RU98_GL001418 | Carbonic anhydrase. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.876 |
OJG28169.1 | OJG28171.1 | RU98_GL001417 | RU98_GL001419 | Carbonic anhydrase. | Hypothetical protein. | 0.433 |
OJG28169.1 | pyrE | RU98_GL001417 | RU98_GL001416 | Carbonic anhydrase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.468 |
OJG28170.1 | OJG27600.1 | RU98_GL001418 | RU98_GL002303 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.402 |
OJG28170.1 | OJG28169.1 | RU98_GL001418 | RU98_GL001417 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Carbonic anhydrase. | 0.876 |
OJG28170.1 | OJG28171.1 | RU98_GL001418 | RU98_GL001419 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.452 |
OJG28170.1 | pyrE | RU98_GL001418 | RU98_GL001416 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.450 |
OJG28171.1 | OJG28169.1 | RU98_GL001419 | RU98_GL001417 | Hypothetical protein. | Carbonic anhydrase. | 0.433 |
OJG28171.1 | OJG28170.1 | RU98_GL001419 | RU98_GL001418 | Hypothetical protein. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.452 |
pyrE | OJG28169.1 | RU98_GL001416 | RU98_GL001417 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Carbonic anhydrase. | 0.468 |
pyrE | OJG28170.1 | RU98_GL001416 | RU98_GL001418 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.450 |