STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG28200.1Cell surface hydrolase. (306 aa)    
Predicted Functional Partners:
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.775
OJG27868.1
Phospholipase/carboxylesterase.
     
 0.714
OJG28199.1
Hypothetical protein.
       0.661
OJG28202.1
Hypothetical protein.
     
 0.651
OJG24063.1
Glycosyl transferase, group 1 family protein.
    
 
 0.598
OJG24064.1
Glycosyl transferase, group 1 family protein.
    
 
 0.598
OJG23185.1
Hypothetical protein.
    
 
 0.598
OJG23187.1
Hypothetical protein.
    
 
 0.598
OJG23191.1
Hypothetical protein.
    
 
 0.598
OJG28205.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.501
Your Current Organism:
Enterococcus caccae
NCBI taxonomy Id: 317735
Other names: CCUG 51564, E. caccae, Enterococcus caccae Carvalho et al. 2006, strain 2215-02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.