Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG24627.1 | OJG25682.1 | RU98_GL001693 | RU98_GL000923 | Hypothetical protein. | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.589 |
OJG24627.1 | OJG27663.1 | RU98_GL001693 | RU98_GL002366 | Hypothetical protein. | Hypothetical protein. | 0.678 |
OJG24627.1 | OJG28423.1 | RU98_GL001693 | RU98_GL000016 | Hypothetical protein. | Selenium-dependent molybdenum hydroxylase 1. | 0.805 |
OJG24627.1 | OJG28695.1 | RU98_GL001693 | RU98_GL000288 | Hypothetical protein. | Deoxynucleoside kinase. | 0.727 |
OJG24627.1 | OJG28768.1 | RU98_GL001693 | RU98_GL000361 | Hypothetical protein. | Ribonucleoside hydrolase RihC. | 0.678 |
OJG24627.1 | birA | RU98_GL001693 | RU98_GL001238 | Hypothetical protein. | biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.727 |
OJG24627.1 | tdk | RU98_GL001693 | RU98_GL003121 | Hypothetical protein. | Thymidine kinase. | 0.730 |
OJG24627.1 | thyA | RU98_GL001693 | RU98_GL001493 | Hypothetical protein. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.657 |
OJG24627.1 | tmk | RU98_GL001693 | RU98_GL001271 | Hypothetical protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.597 |
OJG24627.1 | udk | RU98_GL001693 | RU98_GL001185 | Hypothetical protein. | Uridine kinase. | 0.724 |
OJG25682.1 | OJG24627.1 | RU98_GL000923 | RU98_GL001693 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein. | 0.589 |
OJG25682.1 | OJG27663.1 | RU98_GL000923 | RU98_GL002366 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein. | 0.824 |
OJG25682.1 | OJG28695.1 | RU98_GL000923 | RU98_GL000288 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Deoxynucleoside kinase. | 0.458 |
OJG25682.1 | OJG28768.1 | RU98_GL000923 | RU98_GL000361 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Ribonucleoside hydrolase RihC. | 0.824 |
OJG25682.1 | tdk | RU98_GL000923 | RU98_GL003121 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Thymidine kinase. | 0.913 |
OJG25682.1 | udk | RU98_GL000923 | RU98_GL001185 | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Uridine kinase. | 0.591 |
OJG27663.1 | OJG24627.1 | RU98_GL002366 | RU98_GL001693 | Hypothetical protein. | Hypothetical protein. | 0.678 |
OJG27663.1 | OJG25682.1 | RU98_GL002366 | RU98_GL000923 | Hypothetical protein. | Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.824 |
OJG27663.1 | udk | RU98_GL002366 | RU98_GL001185 | Hypothetical protein. | Uridine kinase. | 0.823 |
OJG28423.1 | OJG24627.1 | RU98_GL000016 | RU98_GL001693 | Selenium-dependent molybdenum hydroxylase 1. | Hypothetical protein. | 0.805 |
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