Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG23581.1 | OJG23582.1 | RU98_GL001836 | RU98_GL001837 | Sporulation initiation inhibitor protein soj. | ParB-like partition protein; Belongs to the ParB family. | 0.998 |
OJG23581.1 | OJG23590.1 | RU98_GL001836 | RU98_GL001845 | Sporulation initiation inhibitor protein soj. | Hypothetical protein. | 0.667 |
OJG23581.1 | OJG23592.1 | RU98_GL001836 | RU98_GL001847 | Sporulation initiation inhibitor protein soj. | Hypothetical protein. | 0.634 |
OJG23581.1 | OJG27549.1 | RU98_GL001836 | RU98_GL002638 | Sporulation initiation inhibitor protein soj. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.542 |
OJG23581.1 | ftsZ | RU98_GL001836 | RU98_GL001815 | Sporulation initiation inhibitor protein soj. | Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.599 |
OJG23581.1 | rsmG | RU98_GL001836 | RU98_GL001835 | Sporulation initiation inhibitor protein soj. | Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.920 |
OJG23581.1 | ychF | RU98_GL001836 | RU98_GL001846 | Sporulation initiation inhibitor protein soj. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.719 |
OJG23582.1 | OJG23581.1 | RU98_GL001837 | RU98_GL001836 | ParB-like partition protein; Belongs to the ParB family. | Sporulation initiation inhibitor protein soj. | 0.998 |
OJG23582.1 | OJG23590.1 | RU98_GL001837 | RU98_GL001845 | ParB-like partition protein; Belongs to the ParB family. | Hypothetical protein. | 0.662 |
OJG23582.1 | OJG23592.1 | RU98_GL001837 | RU98_GL001847 | ParB-like partition protein; Belongs to the ParB family. | Hypothetical protein. | 0.662 |
OJG23582.1 | OJG27549.1 | RU98_GL001837 | RU98_GL002638 | ParB-like partition protein; Belongs to the ParB family. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.769 |
OJG23582.1 | ftsA | RU98_GL001837 | RU98_GL001816 | ParB-like partition protein; Belongs to the ParB family. | Cell division protein ftsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.613 |
OJG23582.1 | ftsZ | RU98_GL001837 | RU98_GL001815 | ParB-like partition protein; Belongs to the ParB family. | Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.633 |
OJG23582.1 | guaA | RU98_GL001837 | RU98_GL000957 | ParB-like partition protein; Belongs to the ParB family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.834 |
OJG23582.1 | polA | RU98_GL001837 | RU98_GL003002 | ParB-like partition protein; Belongs to the ParB family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.634 |
OJG23582.1 | rsmG | RU98_GL001837 | RU98_GL001835 | ParB-like partition protein; Belongs to the ParB family. | Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.953 |
OJG23582.1 | ychF | RU98_GL001837 | RU98_GL001846 | ParB-like partition protein; Belongs to the ParB family. | GTP-dependent nucleic acid-binding protein engD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.694 |
OJG23590.1 | OJG23581.1 | RU98_GL001845 | RU98_GL001836 | Hypothetical protein. | Sporulation initiation inhibitor protein soj. | 0.667 |
OJG23590.1 | OJG23582.1 | RU98_GL001845 | RU98_GL001837 | Hypothetical protein. | ParB-like partition protein; Belongs to the ParB family. | 0.662 |
OJG23590.1 | OJG23592.1 | RU98_GL001845 | RU98_GL001847 | Hypothetical protein. | Hypothetical protein. | 0.819 |
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