Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG23362.1 | OJG27839.1 | RU98_GL001857 | RU98_GL002048 | Type 2 lantibiotic biosynthesis protein LanM. | Permease. | 0.427 |
OJG27147.1 | OJG27839.1 | RU98_GL002927 | RU98_GL002048 | Hypothetical protein. | Permease. | 0.624 |
OJG27327.1 | OJG27839.1 | RU98_GL002779 | RU98_GL002048 | Type 2 lantibiotic biosynthesis protein LanM. | Permease. | 0.452 |
OJG27825.1 | OJG27826.1 | RU98_GL002034 | RU98_GL002035 | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Hypothetical protein; Belongs to the UPF0297 family. | 0.984 |
OJG27825.1 | OJG27838.1 | RU98_GL002034 | RU98_GL002047 | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Membrane protein. | 0.510 |
OJG27825.1 | OJG27839.1 | RU98_GL002034 | RU98_GL002048 | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Permease. | 0.431 |
OJG27826.1 | OJG27825.1 | RU98_GL002035 | RU98_GL002034 | Hypothetical protein; Belongs to the UPF0297 family. | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.984 |
OJG27826.1 | OJG27838.1 | RU98_GL002035 | RU98_GL002047 | Hypothetical protein; Belongs to the UPF0297 family. | Membrane protein. | 0.510 |
OJG27826.1 | OJG27839.1 | RU98_GL002035 | RU98_GL002048 | Hypothetical protein; Belongs to the UPF0297 family. | Permease. | 0.431 |
OJG27838.1 | OJG27825.1 | RU98_GL002047 | RU98_GL002034 | Membrane protein. | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.510 |
OJG27838.1 | OJG27826.1 | RU98_GL002047 | RU98_GL002035 | Membrane protein. | Hypothetical protein; Belongs to the UPF0297 family. | 0.510 |
OJG27838.1 | OJG27839.1 | RU98_GL002047 | RU98_GL002048 | Membrane protein. | Permease. | 0.982 |
OJG27839.1 | OJG23362.1 | RU98_GL002048 | RU98_GL001857 | Permease. | Type 2 lantibiotic biosynthesis protein LanM. | 0.427 |
OJG27839.1 | OJG27147.1 | RU98_GL002048 | RU98_GL002927 | Permease. | Hypothetical protein. | 0.624 |
OJG27839.1 | OJG27327.1 | RU98_GL002048 | RU98_GL002779 | Permease. | Type 2 lantibiotic biosynthesis protein LanM. | 0.452 |
OJG27839.1 | OJG27825.1 | RU98_GL002048 | RU98_GL002034 | Permease. | YqgF family RNAse H domain-containing protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.431 |
OJG27839.1 | OJG27826.1 | RU98_GL002048 | RU98_GL002035 | Permease. | Hypothetical protein; Belongs to the UPF0297 family. | 0.431 |
OJG27839.1 | OJG27838.1 | RU98_GL002048 | RU98_GL002047 | Permease. | Membrane protein. | 0.982 |
OJG27839.1 | atpA | RU98_GL002048 | RU98_GL000054 | Permease. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.423 |
OJG27839.1 | atpB | RU98_GL002048 | RU98_GL000058 | Permease. | ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.430 |
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